SubtiBank SubtiBank
ydgK [2018-10-04 20:23:06]
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ydgK [2018-10-04 20:23:06]

similar to bicyclomycin resistance protein
Locus
BSU05680
Isoelectric point
10.09
Molecular weight
42.52 kDa
Protein length
402 aa Sequence Blast
Gene length
1206 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Cellular processes → Transporters → Transporters/ other → Other transporters
  • Lifestyles → Coping with stress → Resistance against toxins/ antibiotics/ based on similarity
  • Groups of genes → Membrane proteins

    • Gene

    Coordinates
    613,641 → 614,849

    The protein

    Protein family

  • Bcr/cmlA family (according to Swiss-Prot)

    • Structure

  • 2GFP (from E. coli, 28% identity) PubMed

    • Localization

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    Genes
    ydgK
    Description
    PubMed
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    Biological materials

    Mutant

  • MGNA-C176 (ydgK::erm), available at the NBRP B. subtilis, Japan
  • BKE05680 (ΔydgK::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTATCAAACCTTCCCT, downstream forward: _UP4_TAAAAAAACCTGACATGACG
  • BKK05680 (ΔydgK::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTATCAAACCTTCCCT, downstream forward: _UP4_TAAAAAAACCTGACATGACG

    • References

    Research papers

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